Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCNX1Q96RV3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCNX1Q96RV3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.51■□□□□ 0.39
PCNX1Q96RV3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCNX1Q96RV3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 C1QL1P1-201ENST00000568105 661 ntBASIC17.49■□□□□ 0.39
PCNX1Q96RV3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 PLK5-205ENST00000642079 1969 ntBASIC17.49■□□□□ 0.39
PCNX1Q96RV3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 AC104076.2-201ENST00000448912 469 ntBASIC17.49■□□□□ 0.39
PCNX1Q96RV3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 AC026310.3-201ENST00000625186 2373 ntBASIC17.49■□□□□ 0.39
PCNX1Q96RV3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCNX1Q96RV3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
PCNX1Q96RV3 FP700111.2-201ENST00000619190 1892 ntBASIC17.48■□□□□ 0.39
PCNX1Q96RV3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms