Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.79■□□□□ 0.6
BBS4Q96RK4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 NCF1B-203ENST00000435988 1254 ntBASIC18.79■□□□□ 0.6
BBS4Q96RK4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BBS4Q96RK4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BBS4Q96RK4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TMEM179-206ENST00000616017 1645 ntBASIC18.78■□□□□ 0.6
BBS4Q96RK4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.78■□□□□ 0.6
BBS4Q96RK4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS4Q96RK4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
BBS4Q96RK4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BBS4Q96RK4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS4Q96RK4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.77■□□□□ 0.59
BBS4Q96RK4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BBS4Q96RK4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.77■□□□□ 0.59
BBS4Q96RK4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 DUSP5P2-201ENST00000426873 1033 ntBASIC18.76■□□□□ 0.59
BBS4Q96RK4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.76■□□□□ 0.59
BBS4Q96RK4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
BBS4Q96RK4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS4Q96RK4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms