Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.52■□□□□ 0.55
MS4A4EQ96PG1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 MYC-209ENST00000641252 345 ntBASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
MS4A4EQ96PG1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 AC097658.1-201ENST00000475555 843 ntBASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 AC005829.2-201ENST00000571422 1056 ntBASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.5■□□□□ 0.55
MS4A4EQ96PG1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 AL138781.1-201ENST00000566567 1274 ntBASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MS4A4EQ96PG1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MS4A4EQ96PG1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms