Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 AC239809.2-201ENST00000415381 517 ntBASIC20.45■□□□□ 0.86
RPRD1AQ96P16 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 RPPH1-201ENST00000516869 333 ntBASIC20.45■□□□□ 0.86
RPRD1AQ96P16 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPRD1AQ96P16 PHGDH-210ENST00000641115 1638 ntBASIC20.45■□□□□ 0.86
RPRD1AQ96P16 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 AL359736.2-201ENST00000621992 437 ntBASIC20.44■□□□□ 0.86
RPRD1AQ96P16 FAM197Y4-202ENST00000622692 608 ntBASIC20.44■□□□□ 0.86
RPRD1AQ96P16 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPRD1AQ96P16 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 AC099778.1-201ENST00000568593 1911 ntBASIC20.43■□□□□ 0.86
RPRD1AQ96P16 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPRD1AQ96P16 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 AC116351.2-201ENST00000606540 1585 ntBASIC20.42■□□□□ 0.86
RPRD1AQ96P16 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 KRASP1-201ENST00000407852 552 ntBASIC20.42■□□□□ 0.86
RPRD1AQ96P16 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms