Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 AC018553.1-201ENST00000616682 1458 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 TUBB8P6-201ENST00000436895 1288 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 KRT18P16-201ENST00000510337 1294 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 C2orf69P3-201ENST00000565542 1120 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 DGCR10-201ENST00000609839 495 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
ZNF558Q96NG5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF558Q96NG5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF558Q96NG5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF558Q96NG5 AF106564.1-201ENST00000607058 2553 ntBASIC21.14■□□□□ 0.98
ZNF558Q96NG5 AC073508.3-201ENST00000619697 1419 ntBASIC21.14■□□□□ 0.98
ZNF558Q96NG5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF558Q96NG5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 B3GAT3P1-201ENST00000471720 806 ntBASIC21.14■□□□□ 0.97
ZNF558Q96NG5 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 AP005242.2-201ENST00000580065 1175 ntBASIC21.14■□□□□ 0.97
ZNF558Q96NG5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ZNF558Q96NG5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 AC131212.4-201ENST00000623606 975 ntBASIC21.13■□□□□ 0.97
ZNF558Q96NG5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF558Q96NG5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 AC133561.1-201ENST00000568600 2415 ntBASIC21.12■□□□□ 0.97
ZNF558Q96NG5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 AC004980.1-204ENST00000429707 299 ntBASIC21.12■□□□□ 0.97
ZNF558Q96NG5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF558Q96NG5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 AC007225.1-201ENST00000566331 1836 ntBASIC21.11■□□□□ 0.97
ZNF558Q96NG5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 AC011506.1-201ENST00000474329 610 ntBASIC21.11■□□□□ 0.97
ZNF558Q96NG5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 AC092720.2-201ENST00000602388 1665 ntBASIC21.11■□□□□ 0.97
ZNF558Q96NG5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ZNF558Q96NG5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms