Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 AC091799.1-201ENST00000422823 811 ntBASIC17.06■□□□□ 0.32
CMTM3Q96MX0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CMTM3Q96MX0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 AC010141.2-201ENST00000452426 721 ntBASIC17.05■□□□□ 0.32
CMTM3Q96MX0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 AC012414.1-201ENST00000556676 535 ntBASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TPRG1LP1-201ENST00000598702 760 ntBASIC17.05■□□□□ 0.32
CMTM3Q96MX0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CMTM3Q96MX0 KRT16P6-202ENST00000425692 1426 ntBASIC17.04■□□□□ 0.32
CMTM3Q96MX0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 AC135050.7-201ENST00000624508 2218 ntBASIC17.04■□□□□ 0.32
CMTM3Q96MX0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 AL355001.2-201ENST00000620617 1191 ntBASIC17.04■□□□□ 0.32
CMTM3Q96MX0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMTM3Q96MX0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.03■□□□□ 0.32
CMTM3Q96MX0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CMTM3Q96MX0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms