Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALPK3Q96L96 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.8■■□□□ 1.08
ALPK3Q96L96 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.8■■□□□ 1.08
ALPK3Q96L96 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.8■■□□□ 1.08
ALPK3Q96L96 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.8■■□□□ 1.08
ALPK3Q96L96 AP000692.2-201ENST00000608391 879 ntBASIC21.8■■□□□ 1.08
ALPK3Q96L96 AC116562.4-202ENST00000641738 218 ntBASIC21.8■■□□□ 1.08
ALPK3Q96L96 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ALPK3Q96L96 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.8■■□□□ 1.08
ALPK3Q96L96 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ALPK3Q96L96 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 AC111152.3-201ENST00000569699 673 ntBASIC21.79■■□□□ 1.08
ALPK3Q96L96 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALPK3Q96L96 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.79■■□□□ 1.08
ALPK3Q96L96 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 IFNL4P1-201ENST00000607083 540 ntBASIC21.78■■□□□ 1.08
ALPK3Q96L96 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALPK3Q96L96 CR769767.2-201ENST00000622735 460 ntBASIC21.78■■□□□ 1.08
ALPK3Q96L96 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.78■■□□□ 1.08
ALPK3Q96L96 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.77■■□□□ 1.08
ALPK3Q96L96 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.77■■□□□ 1.08
ALPK3Q96L96 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.77■■□□□ 1.08
ALPK3Q96L96 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.77■■□□□ 1.08
ALPK3Q96L96 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 HOMER2P1-201ENST00000455653 964 ntBASIC21.77■■□□□ 1.08
ALPK3Q96L96 AC011298.2-201ENST00000617989 482 ntBASIC21.77■■□□□ 1.08
ALPK3Q96L96 AC131212.4-201ENST00000623606 975 ntBASIC21.77■■□□□ 1.08
ALPK3Q96L96 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ALPK3Q96L96 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALPK3Q96L96 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
ALPK3Q96L96 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 AC133561.1-201ENST00000568600 2415 ntBASIC21.76■■□□□ 1.07
ALPK3Q96L96 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 AL671883.3-201ENST00000603274 991 ntBASIC21.76■■□□□ 1.07
ALPK3Q96L96 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ALPK3Q96L96 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ALPK3Q96L96 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms