Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRIP1Q96KN7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRIP1Q96KN7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRIP1Q96KN7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRIP1Q96KN7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPGRIP1Q96KN7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
RPGRIP1Q96KN7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.83■■□□□ 1.08
RPGRIP1Q96KN7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RPGRIP1Q96KN7 AC092368.3-202ENST00000574180 1591 ntBASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPGRIP1Q96KN7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPGRIP1Q96KN7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 AC018445.3-201ENST00000624177 1945 ntBASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 BX088651.1-201ENST00000540551 451 ntBASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPGRIP1Q96KN7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 AL020996.1-203ENST00000536896 2307 ntBASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.79■■□□□ 1.08
RPGRIP1Q96KN7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 AC087289.5-201ENST00000586076 3175 ntBASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 FP700111.2-201ENST00000619190 1892 ntBASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 AL589743.5-201ENST00000616611 1050 ntBASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms