Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 KRT8P17-201ENST00000453110 1448 ntBASIC17.89■□□□□ 0.46
SNRNP40Q96DI7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.89■□□□□ 0.46
SNRNP40Q96DI7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SNRNP40Q96DI7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 TSPY14P-201ENST00000303979 915 ntBASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 Z98882.1-201ENST00000622160 2253 ntBASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SNRNP40Q96DI7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 DGCR10-201ENST00000609839 495 ntBASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNRNP40Q96DI7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 CRYGFP-201ENST00000418459 633 ntBASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 AC011506.1-201ENST00000474329 610 ntBASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 AC128688.1-201ENST00000487626 519 ntBASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 AC097488.1-201ENST00000507834 756 ntBASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNRNP40Q96DI7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 AL049796.1-201ENST00000565336 1766 ntBASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms