Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 AC110285.5-201ENST00000611501 352 ntBASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC3Q96DC8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 UBE2SP1-201ENST00000450587 669 ntBASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC3Q96DC8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 NBPF21P-201ENST00000425093 1451 ntBASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 FAM197Y4-202ENST00000622692 608 ntBASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 AP001271.2-201ENST00000624018 1556 ntBASIC19.87■□□□□ 0.77
ECHDC3Q96DC8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 TCF3P1-201ENST00000423021 1937 ntBASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC3Q96DC8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC3Q96DC8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms