Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF25Q96BH1 KRT8P17-201ENST00000453110 1448 ntBASIC20.82■□□□□ 0.92
RNF25Q96BH1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 AC093787.1-201ENST00000450396 207 ntBASIC20.82■□□□□ 0.92
RNF25Q96BH1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 IKBKGP1-201ENST00000612193 1073 ntBASIC20.82■□□□□ 0.92
RNF25Q96BH1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF25Q96BH1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF25Q96BH1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF25Q96BH1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF25Q96BH1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 AC010980.2-201ENST00000587099 1412 ntBASIC20.81■□□□□ 0.92
RNF25Q96BH1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF25Q96BH1 AC092437.1-201ENST00000624794 1048 ntBASIC20.81■□□□□ 0.92
RNF25Q96BH1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF25Q96BH1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF25Q96BH1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF25Q96BH1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF25Q96BH1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF25Q96BH1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF25Q96BH1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF25Q96BH1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 AC005181.1-201ENST00000604782 1256 ntBASIC20.8■□□□□ 0.92
RNF25Q96BH1 OR10C1-204ENST00000622521 1039 ntBASIC20.8■□□□□ 0.92
RNF25Q96BH1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF25Q96BH1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF25Q96BH1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF25Q96BH1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 KRT17P1-201ENST00000399211 1546 ntBASIC20.78■□□□□ 0.92
RNF25Q96BH1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF25Q96BH1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF25Q96BH1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RNF25Q96BH1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RNF25Q96BH1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF25Q96BH1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
RNF25Q96BH1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms