Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 MYC-209ENST00000641252 345 ntBASIC19.09■□□□□ 0.65
UBE2E3Q969T4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 PHGDH-210ENST00000641115 1638 ntBASIC19.09■□□□□ 0.65
UBE2E3Q969T4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.09■□□□□ 0.65
UBE2E3Q969T4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2E3Q969T4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.08■□□□□ 0.65
UBE2E3Q969T4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.08■□□□□ 0.64
UBE2E3Q969T4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 AC104771.1-201ENST00000603335 964 ntBASIC19.07■□□□□ 0.64
UBE2E3Q969T4 HLA-B-256ENST00000639848 1089 ntBASIC19.07■□□□□ 0.64
UBE2E3Q969T4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2E3Q969T4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE2E3Q969T4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms