Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC1Q92922 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC1Q92922 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC1Q92922 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 AC091390.4-202ENST00000476426 537 ntBASIC25.49■■□□□ 1.67
SMARCC1Q92922 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC1Q92922 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.49■■□□□ 1.67
SMARCC1Q92922 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.48■■□□□ 1.67
SMARCC1Q92922 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC1Q92922 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC1Q92922 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.48■■□□□ 1.67
SMARCC1Q92922 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC1Q92922 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SMARCC1Q92922 MYC-208ENST00000641036 567 ntBASIC25.48■■□□□ 1.67
SMARCC1Q92922 AC116562.4-202ENST00000641738 218 ntBASIC25.48■■□□□ 1.67
SMARCC1Q92922 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
SMARCC1Q92922 AL121603.2-201ENST00000557373 2117 ntBASIC25.48■■□□□ 1.67
SMARCC1Q92922 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SMARCC1Q92922 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.47■■□□□ 1.67
SMARCC1Q92922 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC1Q92922 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SMARCC1Q92922 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC1Q92922 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC1Q92922 AL024507.2-201ENST00000606070 2574 ntBASIC25.47■■□□□ 1.67
SMARCC1Q92922 RNF152P1-201ENST00000397754 604 ntBASIC25.47■■□□□ 1.67
SMARCC1Q92922 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.47■■□□□ 1.67
SMARCC1Q92922 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC1Q92922 AL138966.2-201ENST00000621997 464 ntBASIC25.47■■□□□ 1.67
SMARCC1Q92922 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC1Q92922 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.47■■□□□ 1.67
SMARCC1Q92922 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SMARCC1Q92922 KRT16P6-202ENST00000425692 1426 ntBASIC25.46■■□□□ 1.67
SMARCC1Q92922 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.46■■□□□ 1.67
SMARCC1Q92922 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 RCC2P6-201ENST00000526625 1557 ntBASIC25.46■■□□□ 1.67
SMARCC1Q92922 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 AC018553.1-201ENST00000616682 1458 ntBASIC25.46■■□□□ 1.67
SMARCC1Q92922 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMARCC1Q92922 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.46■■□□□ 1.67
SMARCC1Q92922 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMARCC1Q92922 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMARCC1Q92922 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.45■■□□□ 1.67
SMARCC1Q92922 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
SMARCC1Q92922 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMARCC1Q92922 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 AC011298.2-201ENST00000617989 482 ntBASIC25.45■■□□□ 1.66
SMARCC1Q92922 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.45■■□□□ 1.66
SMARCC1Q92922 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMARCC1Q92922 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 CCR12P-201ENST00000446203 998 ntBASIC25.44■■□□□ 1.66
SMARCC1Q92922 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 AC139887.4-201ENST00000607877 719 ntBASIC25.44■■□□□ 1.66
SMARCC1Q92922 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SMARCC1Q92922 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMARCC1Q92922 AC096733.2-201ENST00000609937 1394 ntBASIC25.44■■□□□ 1.66
SMARCC1Q92922 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMARCC1Q92922 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.43■■□□□ 1.66
SMARCC1Q92922 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms