Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT9Q92600 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.27■□□□□ 0.52
CNOT9Q92600 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.27■□□□□ 0.52
CNOT9Q92600 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT9Q92600 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
CNOT9Q92600 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT9Q92600 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CNOT9Q92600 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CNOT9Q92600 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNOT9Q92600 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CNOT9Q92600 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNOT9Q92600 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNOT9Q92600 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.26■□□□□ 0.51
CNOT9Q92600 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CNOT9Q92600 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CNOT9Q92600 TSPY6P-201ENST00000448518 926 ntBASIC18.26■□□□□ 0.51
CNOT9Q92600 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.26■□□□□ 0.51
CNOT9Q92600 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CNOT9Q92600 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.26■□□□□ 0.51
CNOT9Q92600 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.26■□□□□ 0.51
CNOT9Q92600 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNOT9Q92600 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CNOT9Q92600 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.26■□□□□ 0.51
CNOT9Q92600 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.26■□□□□ 0.51
CNOT9Q92600 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
CNOT9Q92600 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT9Q92600 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 AL158211.5-201ENST00000623583 2518 ntBASIC18.25■□□□□ 0.51
CNOT9Q92600 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
CNOT9Q92600 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.25■□□□□ 0.51
CNOT9Q92600 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.25■□□□□ 0.51
CNOT9Q92600 SLC29A4P1-201ENST00000398760 971 ntBASIC18.25■□□□□ 0.51
CNOT9Q92600 DUSP5P2-201ENST00000426873 1033 ntBASIC18.25■□□□□ 0.51
CNOT9Q92600 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.25■□□□□ 0.51
CNOT9Q92600 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.25■□□□□ 0.51
CNOT9Q92600 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.25■□□□□ 0.51
CNOT9Q92600 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.25■□□□□ 0.51
CNOT9Q92600 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.25■□□□□ 0.51
CNOT9Q92600 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.25■□□□□ 0.51
CNOT9Q92600 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CNOT9Q92600 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNOT9Q92600 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.24■□□□□ 0.51
CNOT9Q92600 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.24■□□□□ 0.51
CNOT9Q92600 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.24■□□□□ 0.51
CNOT9Q92600 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.24■□□□□ 0.51
CNOT9Q92600 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.24■□□□□ 0.51
CNOT9Q92600 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CNOT9Q92600 AC092118.2-201ENST00000613495 667 ntBASIC18.24■□□□□ 0.51
CNOT9Q92600 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
CNOT9Q92600 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNOT9Q92600 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CNOT9Q92600 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CNOT9Q92600 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.23■□□□□ 0.51
CNOT9Q92600 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms