Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 FITM1-202ENST00000559294 800 ntBASIC19.95■□□□□ 0.78
HMGB4Q8WW32 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 AF106564.1-201ENST00000607058 2553 ntBASIC19.95■□□□□ 0.78
HMGB4Q8WW32 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 AC113347.1-201ENST00000413321 391 ntBASIC19.94■□□□□ 0.78
HMGB4Q8WW32 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 AL590326.2-201ENST00000625139 305 ntBASIC19.94■□□□□ 0.78
HMGB4Q8WW32 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 KRT18P22-201ENST00000402024 1347 ntBASIC19.94■□□□□ 0.78
HMGB4Q8WW32 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.94■□□□□ 0.78
HMGB4Q8WW32 AC005229.4-201ENST00000610085 2198 ntBASIC19.94■□□□□ 0.78
HMGB4Q8WW32 DPP3P2-201ENST00000416030 1696 ntBASIC19.94■□□□□ 0.78
HMGB4Q8WW32 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 AC010947.1-201ENST00000623454 693 ntBASIC19.93■□□□□ 0.78
HMGB4Q8WW32 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGB4Q8WW32 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 AL031985.4-201ENST00000642138 673 ntBASIC19.92■□□□□ 0.78
HMGB4Q8WW32 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HMGB4Q8WW32 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 AL137013.1-201ENST00000432946 1228 ntBASIC19.91■□□□□ 0.78
HMGB4Q8WW32 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMGB4Q8WW32 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 TERF1P1-201ENST00000311003 1181 ntBASIC19.9■□□□□ 0.78
HMGB4Q8WW32 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.9■□□□□ 0.78
HMGB4Q8WW32 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms