Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 CCR12P-201ENST00000446203 998 ntBASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 AC092119.3-201ENST00000612618 583 ntBASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 HLA-A-209ENST00000638375 975 ntBASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ALMS1Q8TCU4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 AC116562.4-202ENST00000641738 218 ntBASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ALMS1Q8TCU4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ALMS1Q8TCU4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ALMS1Q8TCU4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.46□□□□□ -0.26
ALMS1Q8TCU4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.46□□□□□ -0.26
ALMS1Q8TCU4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.46□□□□□ -0.26
ALMS1Q8TCU4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 MIR3180-1-201ENST00000580374 94 ntBASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 MIR3180-3-201ENST00000584616 94 ntBASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 SPDYE13P-201ENST00000445314 798 ntBASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 HOMER2P1-201ENST00000455653 964 ntBASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.45□□□□□ -0.26
ALMS1Q8TCU4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 FDX1P1-201ENST00000449115 551 ntBASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 RN7SL510P-201ENST00000581311 263 ntBASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 AC011298.2-201ENST00000617989 482 ntBASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms