Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 AC018553.1-201ENST00000616682 1458 ntBASIC21.36■■□□□ 1.01
BEST2Q8NFU1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 AL162377.1-201ENST00000618844 1793 ntBASIC21.35■■□□□ 1.01
BEST2Q8NFU1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST2Q8NFU1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 MIR718-201ENST00000390190 70 ntBASIC21.34■■□□□ 1.01
BEST2Q8NFU1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 Z99916.2-201ENST00000604037 246 ntBASIC21.34■■□□□ 1.01
BEST2Q8NFU1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 TFP1-202ENST00000475455 1573 ntBASIC21.34■■□□□ 1.01
BEST2Q8NFU1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST2Q8NFU1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 AC092667.1-201ENST00000434301 2586 ntBASIC21.33■■□□□ 1.01
BEST2Q8NFU1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST2Q8NFU1 AC004264.1-201ENST00000608354 794 ntBASIC21.33■■□□□ 1.01
BEST2Q8NFU1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.33■■□□□ 1
BEST2Q8NFU1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.33■■□□□ 1
BEST2Q8NFU1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.33■■□□□ 1
BEST2Q8NFU1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.33■■□□□ 1
BEST2Q8NFU1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
BEST2Q8NFU1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
BEST2Q8NFU1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.32■■□□□ 1
BEST2Q8NFU1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST2Q8NFU1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.32■■□□□ 1
BEST2Q8NFU1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.32■■□□□ 1
BEST2Q8NFU1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.32■■□□□ 1
BEST2Q8NFU1 KRT16P5-201ENST00000455284 522 ntBASIC21.32■■□□□ 1
BEST2Q8NFU1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.32■■□□□ 1
BEST2Q8NFU1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
BEST2Q8NFU1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.32■■□□□ 1
BEST2Q8NFU1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.32■■□□□ 1
BEST2Q8NFU1 AP006587.1-201ENST00000534129 1502 ntBASIC21.32■■□□□ 1
BEST2Q8NFU1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
BEST2Q8NFU1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.32■■□□□ 1
BEST2Q8NFU1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.32■■□□□ 1
BEST2Q8NFU1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.31■■□□□ 1
BEST2Q8NFU1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.31■■□□□ 1
BEST2Q8NFU1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.31■■□□□ 1
BEST2Q8NFU1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.31■■□□□ 1
BEST2Q8NFU1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
BEST2Q8NFU1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
BEST2Q8NFU1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.31■■□□□ 1
BEST2Q8NFU1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.31■■□□□ 1
BEST2Q8NFU1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.31■■□□□ 1
BEST2Q8NFU1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.31■■□□□ 1
BEST2Q8NFU1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
BEST2Q8NFU1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.31■■□□□ 1
BEST2Q8NFU1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BEST2Q8NFU1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.31■■□□□ 1
BEST2Q8NFU1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST2Q8NFU1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.3■■□□□ 1
BEST2Q8NFU1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.3■■□□□ 1
BEST2Q8NFU1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.3■■□□□ 1
BEST2Q8NFU1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms