Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUP43Q8NFH3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 AC091874.3-201ENST00000512672 1195 ntBASIC18.57■□□□□ 0.56
NUP43Q8NFH3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUP43Q8NFH3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 AC009237.14-201ENST00000609975 1594 ntBASIC18.56■□□□□ 0.56
NUP43Q8NFH3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 MIR4758-201ENST00000577688 71 ntBASIC18.56■□□□□ 0.56
NUP43Q8NFH3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
NUP43Q8NFH3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 PHGDH-210ENST00000641115 1638 ntBASIC18.55■□□□□ 0.56
NUP43Q8NFH3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 AP001271.2-201ENST00000624018 1556 ntBASIC18.55■□□□□ 0.56
NUP43Q8NFH3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUP43Q8NFH3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 AL390719.1-204ENST00000412397 1219 ntBASIC18.54■□□□□ 0.56
NUP43Q8NFH3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.54■□□□□ 0.56
NUP43Q8NFH3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 AC090192.1-201ENST00000517740 490 ntBASIC18.54■□□□□ 0.56
NUP43Q8NFH3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 AL109923.1-201ENST00000618799 583 ntBASIC18.54■□□□□ 0.56
NUP43Q8NFH3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUP43Q8NFH3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms