Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 AC124016.1-201ENST00000609552 612 ntBASIC6.11□□□□□ -1.43
SYNE1Q8NF91 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE1Q8NF91 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 GOLGA2P6-201ENST00000340929 2049 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC113347.1-201ENST00000413321 391 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 MIR6786-201ENST00000616843 113 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AL049637.2-201ENST00000641778 930 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC007322.3-201ENST00000426526 701 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 MCC-208ENST00000514701 2855 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 GLDC-219ENST00000640208 420 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 KRT17P2-201ENST00000300992 1314 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 AL355075.4-201ENST00000554988 638 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CD177P1-201ENST00000606252 935 ntBASIC6.1□□□□□ -1.43
SYNE1Q8NF91 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE1Q8NF91 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE1Q8NF91 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms