Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC89Q8N998 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC89Q8N998 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 AC098818.2-201ENST00000564925 2320 ntBASIC20.54■□□□□ 0.88
CCDC89Q8N998 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC89Q8N998 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC89Q8N998 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC89Q8N998 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC89Q8N998 PTBP1P-201ENST00000554374 1601 ntBASIC20.53■□□□□ 0.88
CCDC89Q8N998 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC89Q8N998 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC89Q8N998 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 CNN2P6-201ENST00000439038 900 ntBASIC20.52■□□□□ 0.88
CCDC89Q8N998 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC89Q8N998 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC89Q8N998 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC89Q8N998 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC89Q8N998 KRT8P17-201ENST00000453110 1448 ntBASIC20.52■□□□□ 0.87
CCDC89Q8N998 AC068338.2-201ENST00000563278 1430 ntBASIC20.52■□□□□ 0.87
CCDC89Q8N998 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC89Q8N998 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC89Q8N998 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 DUX4L16-201ENST00000555130 1264 ntBASIC20.51■□□□□ 0.87
CCDC89Q8N998 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 AC105020.6-201ENST00000621523 1217 ntBASIC20.51■□□□□ 0.87
CCDC89Q8N998 KRT16P6-202ENST00000425692 1426 ntBASIC20.51■□□□□ 0.87
CCDC89Q8N998 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.51■□□□□ 0.87
CCDC89Q8N998 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC89Q8N998 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC89Q8N998 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 AL020996.1-203ENST00000536896 2307 ntBASIC20.5■□□□□ 0.87
CCDC89Q8N998 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC89Q8N998 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC89Q8N998 AP000974.1-201ENST00000623909 2387 ntBASIC20.5■□□□□ 0.87
CCDC89Q8N998 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC89Q8N998 KRT18P68-201ENST00000392293 1000 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms