Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 CROCCP5-201ENST00000436658 830 ntBASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 AP001271.2-201ENST00000624018 1556 ntBASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 MIR663A-201ENST00000385250 93 ntBASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSMEM1Q8N8F7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.14■□□□□ 0.5
LSMEM1Q8N8F7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.14■□□□□ 0.5
LSMEM1Q8N8F7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LSMEM1Q8N8F7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
LSMEM1Q8N8F7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 GPX1P1-201ENST00000388829 606 ntBASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
LSMEM1Q8N8F7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms