Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 DUSP5P2-201ENST00000426873 1033 ntBASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 AC091874.3-201ENST00000512672 1195 ntBASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC9CQ8N5M4 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC9CQ8N5M4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 PCDHAC2-203ENST00000615316 3011 ntBASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 AC097658.1-201ENST00000475555 843 ntBASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 AC090192.1-201ENST00000517740 490 ntBASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 AC009237.14-201ENST00000609975 1594 ntBASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TTC9CQ8N5M4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 AL390719.1-204ENST00000412397 1219 ntBASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TTC9CQ8N5M4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms