Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 PTBP1P-201ENST00000554374 1601 ntBASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 SLC25A3P1-201ENST00000443844 931 ntBASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPOQ8N3V7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 FSCN1P1-201ENST00000568912 1481 ntBASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 AL390955.1-201ENST00000428694 934 ntBASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 AC026271.3-201ENST00000571884 352 ntBASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPOQ8N3V7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 KRT18P57-201ENST00000443599 1254 ntBASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.18■□□□□ 0.82
SYNPOQ8N3V7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNPOQ8N3V7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms