Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA6Q8N139 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
ABCA6Q8N139 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA6Q8N139 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
ABCA6Q8N139 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC29.61■■■□□ 2.33
ABCA6Q8N139 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC29.61■■■□□ 2.33
ABCA6Q8N139 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.61■■■□□ 2.33
ABCA6Q8N139 AC092647.4-201ENST00000457211 535 ntBASIC29.61■■■□□ 2.33
ABCA6Q8N139 COX11P1-201ENST00000489116 835 ntBASIC29.61■■■□□ 2.33
ABCA6Q8N139 AC008622.2-201ENST00000617006 1229 ntBASIC29.61■■■□□ 2.33
ABCA6Q8N139 AC141257.4-201ENST00000634557 245 ntBASIC29.61■■■□□ 2.33
ABCA6Q8N139 AC136944.6-201ENST00000634818 245 ntBASIC29.61■■■□□ 2.33
ABCA6Q8N139 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA6Q8N139 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA6Q8N139 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 AC131212.4-201ENST00000623606 975 ntBASIC29.6■■■□□ 2.33
ABCA6Q8N139 HLA-A-209ENST00000638375 975 ntBASIC29.6■■■□□ 2.33
ABCA6Q8N139 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA6Q8N139 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA6Q8N139 TSPY5P-201ENST00000426936 936 ntBASIC29.6■■■□□ 2.33
ABCA6Q8N139 PTPA-216ENST00000432651 857 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA6Q8N139 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.6■■■□□ 2.33
ABCA6Q8N139 AC010653.2-201ENST00000623505 997 ntBASIC29.6■■■□□ 2.33
ABCA6Q8N139 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ABCA6Q8N139 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 AC008040.2-201ENST00000461049 708 ntBASIC29.59■■■□□ 2.33
ABCA6Q8N139 CYGB-204ENST00000589342 815 ntTSL 3 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 AC069148.1-201ENST00000608741 768 ntBASIC29.59■■■□□ 2.33
ABCA6Q8N139 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC29.59■■■□□ 2.33
ABCA6Q8N139 TFP1-202ENST00000475455 1573 ntBASIC29.59■■■□□ 2.33
ABCA6Q8N139 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA6Q8N139 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC29.58■■■□□ 2.33
ABCA6Q8N139 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA6Q8N139 IPPK-202ENST00000375522 882 ntTSL 3 BASIC29.58■■■□□ 2.33
ABCA6Q8N139 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.58■■■□□ 2.33
ABCA6Q8N139 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.58■■■□□ 2.33
ABCA6Q8N139 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA6Q8N139 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA6Q8N139 KRT8P17-201ENST00000453110 1448 ntBASIC29.58■■■□□ 2.33
ABCA6Q8N139 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC29.58■■■□□ 2.33
ABCA6Q8N139 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA6Q8N139 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA6Q8N139 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 CCR12P-201ENST00000446203 998 ntBASIC29.57■■■□□ 2.32
ABCA6Q8N139 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 GPX4-207ENST00000589115 812 ntTSL 2 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 CLEC4GP1-201ENST00000596555 870 ntBASIC29.57■■■□□ 2.32
ABCA6Q8N139 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA6Q8N139 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
ABCA6Q8N139 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA6Q8N139 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA6Q8N139 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA6Q8N139 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA6Q8N139 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA6Q8N139 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA6Q8N139 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 GOLGA6L3-201ENST00000507199 1679 ntBASIC29.56■■■□□ 2.32
ABCA6Q8N139 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA6Q8N139 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA6Q8N139 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 AL671277.2-201ENST00000458060 996 ntBASIC29.56■■■□□ 2.32
ABCA6Q8N139 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 AC116562.4-202ENST00000641738 218 ntBASIC29.56■■■□□ 2.32
ABCA6Q8N139 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
ABCA6Q8N139 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
ABCA6Q8N139 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 AC004951.3-201ENST00000418645 1148 ntBASIC29.55■■■□□ 2.32
ABCA6Q8N139 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC29.55■■■□□ 2.32
ABCA6Q8N139 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC29.55■■■□□ 2.32
ABCA6Q8N139 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC29.55■■■□□ 2.32
ABCA6Q8N139 AC092338.2-201ENST00000568827 1415 ntBASIC29.55■■■□□ 2.32
ABCA6Q8N139 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA6Q8N139 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms