Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMC5Q8IY18 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMC5Q8IY18 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SMC5Q8IY18 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SMC5Q8IY18 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.58■■□□□ 1.53
SMC5Q8IY18 AC073210.2-201ENST00000430369 194 ntBASIC24.58■■□□□ 1.53
SMC5Q8IY18 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.58■■□□□ 1.53
SMC5Q8IY18 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.58■■□□□ 1.53
SMC5Q8IY18 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.58■■□□□ 1.53
SMC5Q8IY18 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMC5Q8IY18 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.58■■□□□ 1.53
SMC5Q8IY18 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SMC5Q8IY18 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
SMC5Q8IY18 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMC5Q8IY18 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC5Q8IY18 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMC5Q8IY18 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 AL121832.2-201ENST00000610979 668 ntBASIC24.57■■□□□ 1.52
SMC5Q8IY18 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 AC116351.2-201ENST00000606540 1585 ntBASIC24.57■■□□□ 1.52
SMC5Q8IY18 Z82202.1-201ENST00000623446 1880 ntBASIC24.57■■□□□ 1.52
SMC5Q8IY18 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.57■■□□□ 1.52
SMC5Q8IY18 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMC5Q8IY18 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMC5Q8IY18 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC5Q8IY18 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC5Q8IY18 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SMC5Q8IY18 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC5Q8IY18 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 AC092118.2-201ENST00000613495 667 ntBASIC24.56■■□□□ 1.52
SMC5Q8IY18 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 AC018553.1-201ENST00000616682 1458 ntBASIC24.56■■□□□ 1.52
SMC5Q8IY18 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMC5Q8IY18 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.56■■□□□ 1.52
SMC5Q8IY18 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.55■■□□□ 1.52
SMC5Q8IY18 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.55■■□□□ 1.52
SMC5Q8IY18 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMC5Q8IY18 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 DUSP5P2-201ENST00000426873 1033 ntBASIC24.54■■□□□ 1.52
SMC5Q8IY18 NCF1B-203ENST00000435988 1254 ntBASIC24.54■■□□□ 1.52
SMC5Q8IY18 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMC5Q8IY18 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.54■■□□□ 1.52
SMC5Q8IY18 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms