Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 RARRES2P4-201ENST00000514074 484 ntBASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC50Q8IVM0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 RARRES2P6-201ENST00000567333 442 ntBASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 AC011767.1-201ENST00000617410 1153 ntBASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 TMEM179-206ENST00000616017 1645 ntBASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC50Q8IVM0 AC068338.2-201ENST00000563278 1430 ntBASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 CNN2P6-201ENST00000439038 900 ntBASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 DUX4L16-201ENST00000555130 1264 ntBASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC50Q8IVM0 LETM1P2-201ENST00000597330 2178 ntBASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC50Q8IVM0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 AC026471.1-201ENST00000564629 3026 ntBASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC50Q8IVM0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms