Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF135Q8IUD6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF135Q8IUD6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RNF135Q8IUD6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 AC010947.1-201ENST00000623454 693 ntBASIC21.04■□□□□ 0.96
RNF135Q8IUD6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF135Q8IUD6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 AL390955.1-201ENST00000428694 934 ntBASIC21.03■□□□□ 0.96
RNF135Q8IUD6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF135Q8IUD6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 AL121894.2-201ENST00000602977 491 ntBASIC21.02■□□□□ 0.96
RNF135Q8IUD6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF135Q8IUD6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RNF135Q8IUD6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 AL049796.1-201ENST00000565336 1766 ntBASIC21.01■□□□□ 0.95
RNF135Q8IUD6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 UPK3BP1-201ENST00000428678 509 ntBASIC21.01■□□□□ 0.95
RNF135Q8IUD6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 AL121829.2-201ENST00000620908 328 ntBASIC21.01■□□□□ 0.95
RNF135Q8IUD6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF135Q8IUD6 NBPF21P-201ENST00000425093 1451 ntBASIC21.01■□□□□ 0.95
RNF135Q8IUD6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21■□□□□ 0.95
RNF135Q8IUD6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
RNF135Q8IUD6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF135Q8IUD6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF135Q8IUD6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21■□□□□ 0.95
RNF135Q8IUD6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms