Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 AC004264.1-201ENST00000608354 794 ntBASIC22.17■■□□□ 1.14
TRIM50Q86XT4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.17■■□□□ 1.14
TRIM50Q86XT4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.16■■□□□ 1.14
TRIM50Q86XT4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 AC087499.1-201ENST00000418141 1075 ntBASIC22.15■■□□□ 1.14
TRIM50Q86XT4 AL353807.1-201ENST00000427475 662 ntBASIC22.15■■□□□ 1.14
TRIM50Q86XT4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM50Q86XT4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.14
TRIM50Q86XT4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM50Q86XT4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.14■■□□□ 1.14
TRIM50Q86XT4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM50Q86XT4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 AP002982.1-201ENST00000492365 877 ntBASIC22.13■■□□□ 1.13
TRIM50Q86XT4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 AC073195.1-201ENST00000607241 877 ntBASIC22.13■■□□□ 1.13
TRIM50Q86XT4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.13■■□□□ 1.13
TRIM50Q86XT4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM50Q86XT4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms