Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
LRRC28Q86X40 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC28Q86X40 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 AC231657.2-201ENST00000624556 255 ntBASIC17.61■□□□□ 0.41
LRRC28Q86X40 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC28Q86X40 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
LRRC28Q86X40 AC026471.1-201ENST00000564629 3026 ntBASIC17.61■□□□□ 0.41
LRRC28Q86X40 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 AC010536.3-201ENST00000620306 533 ntBASIC17.6■□□□□ 0.41
LRRC28Q86X40 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 LETM1P2-201ENST00000597330 2178 ntBASIC17.6■□□□□ 0.41
LRRC28Q86X40 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC28Q86X40 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC28Q86X40 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 Z82202.1-201ENST00000623446 1880 ntBASIC17.59■□□□□ 0.41
LRRC28Q86X40 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 KRT16P2-201ENST00000414673 1423 ntBASIC17.59■□□□□ 0.41
LRRC28Q86X40 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRRC28Q86X40 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC28Q86X40 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms