Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 AC023632.3-201ENST00000521633 145 ntBASIC19.81■□□□□ 0.76
LDB1Q86U70 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.81■□□□□ 0.76
LDB1Q86U70 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.81■□□□□ 0.76
LDB1Q86U70 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.81■□□□□ 0.76
LDB1Q86U70 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LDB1Q86U70 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LDB1Q86U70 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LDB1Q86U70 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.81■□□□□ 0.76
LDB1Q86U70 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LDB1Q86U70 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LDB1Q86U70 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.8■□□□□ 0.76
LDB1Q86U70 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
LDB1Q86U70 TMEM179-206ENST00000616017 1645 ntBASIC19.8■□□□□ 0.76
LDB1Q86U70 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LDB1Q86U70 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
LDB1Q86U70 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LDB1Q86U70 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.8■□□□□ 0.76
LDB1Q86U70 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LDB1Q86U70 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LDB1Q86U70 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LDB1Q86U70 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
LDB1Q86U70 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.79■□□□□ 0.76
LDB1Q86U70 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.79■□□□□ 0.76
LDB1Q86U70 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.79■□□□□ 0.76
LDB1Q86U70 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.79■□□□□ 0.76
LDB1Q86U70 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 MIR4758-201ENST00000577688 71 ntBASIC19.79■□□□□ 0.76
LDB1Q86U70 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.79■□□□□ 0.76
LDB1Q86U70 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LDB1Q86U70 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.79■□□□□ 0.76
LDB1Q86U70 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LDB1Q86U70 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LDB1Q86U70 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
LDB1Q86U70 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LDB1Q86U70 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.78■□□□□ 0.76
LDB1Q86U70 MYC-209ENST00000641252 345 ntBASIC19.78■□□□□ 0.76
LDB1Q86U70 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.78■□□□□ 0.76
LDB1Q86U70 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
LDB1Q86U70 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDB1Q86U70 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LDB1Q86U70 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LDB1Q86U70 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LDB1Q86U70 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.77■□□□□ 0.76
LDB1Q86U70 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LDB1Q86U70 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 HLA-L-209ENST00000420110 1011 ntBASIC19.77■□□□□ 0.76
LDB1Q86U70 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.77■□□□□ 0.76
LDB1Q86U70 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDB1Q86U70 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LDB1Q86U70 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.76■□□□□ 0.75
LDB1Q86U70 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB1Q86U70 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.76■□□□□ 0.75
LDB1Q86U70 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms