Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC01554Q52M75 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC9.96□□□□□ -0.81
LINC01554Q52M75 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 LSM7-203ENST00000585409 512 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 HSD17B1P1-201ENST00000590052 955 ntBASIC9.96□□□□□ -0.82
LINC01554Q52M75 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 AC079598.2-202ENST00000546624 1451 ntBASIC9.96□□□□□ -0.82
LINC01554Q52M75 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 CROCCP2-202ENST00000412962 2773 ntBASIC9.96□□□□□ -0.82
LINC01554Q52M75 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC01554Q52M75 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
LINC01554Q52M75 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PALM-207ENST00000590161 2137 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 MIR4281-201ENST00000580852 62 ntBASIC9.95□□□□□ -0.82
LINC01554Q52M75 AC010980.1-201ENST00000587192 1142 ntBASIC9.95□□□□□ -0.82
LINC01554Q52M75 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC9.95□□□□□ -0.82
LINC01554Q52M75 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LINC01554Q52M75 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01554Q52M75 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 AL122018.1-201ENST00000446607 2310 ntBASIC9.94□□□□□ -0.82
LINC01554Q52M75 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 REST-206ENST00000612429 1376 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 REST-207ENST00000616975 1370 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01554Q52M75 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC01554Q52M75 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms