Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 AP001271.2-201ENST00000624018 1556 ntBASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN20Q4JDL3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 AC116351.2-201ENST00000606540 1585 ntBASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN20Q4JDL3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 RPS2P52-201ENST00000469610 820 ntBASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 RNA5SP413-201ENST00000516373 109 ntBASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 UNC93B5-201ENST00000530315 699 ntBASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 KRT18P6-201ENST00000555540 1265 ntBASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN20Q4JDL3 AC018553.1-201ENST00000616682 1458 ntBASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN20Q4JDL3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms