Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 AC011484.1-201ENST00000377652 1995 ntBASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 MIR718-201ENST00000390190 70 ntBASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRFAM7AQ494W8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AP003097.1-201ENST00000530657 1135 ntBASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AC073648.6-201ENST00000641589 218 ntBASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRFAM7AQ494W8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 UNC93B5-201ENST00000530315 699 ntBASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 AC053503.5-201ENST00000601508 636 ntBASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRFAM7AQ494W8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 AC008175.2-201ENST00000612840 297 ntBASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms