Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RSPO4Q2I0M5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RSPO4Q2I0M5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 CKBP1-201ENST00000565489 1086 ntBASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 AC010653.2-201ENST00000623505 997 ntBASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RSPO4Q2I0M5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 AC007663.1-201ENST00000438948 1240 ntBASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 FAAHP1-202ENST00000446499 1238 ntBASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 PRSS44-201ENST00000515154 1146 ntBASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 AL441883.1-201ENST00000566170 1045 ntBASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RSPO4Q2I0M5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 C1QL1P1-201ENST00000568105 661 ntBASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 AC233723.2-201ENST00000623798 2106 ntBASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 AL023973.1-201ENST00000624619 620 ntBASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.29■□□□□ 0.68
RSPO4Q2I0M5 AC012676.1-201ENST00000574705 1949 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 AC004980.1-204ENST00000429707 299 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 SLC25A1P2-201ENST00000430693 912 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 KRT18P38-201ENST00000449496 1282 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 AP000692.2-201ENST00000608391 879 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 AC131212.4-201ENST00000623606 975 ntBASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO4Q2I0M5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 AC092119.3-201ENST00000612618 583 ntBASIC19.27■□□□□ 0.68
RSPO4Q2I0M5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms