Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
PDS5AQ29RF7 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.89■■□□□ 1.41
PDS5AQ29RF7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDS5AQ29RF7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 TSPY15P-201ENST00000457163 923 ntBASIC23.88■■□□□ 1.41
PDS5AQ29RF7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 AL445675.2-201ENST00000620291 557 ntBASIC23.88■■□□□ 1.41
PDS5AQ29RF7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDS5AQ29RF7 KRT16P1-201ENST00000399124 1418 ntBASIC23.87■■□□□ 1.41
PDS5AQ29RF7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 AL355355.2-201ENST00000442321 338 ntBASIC23.87■■□□□ 1.41
PDS5AQ29RF7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.87■■□□□ 1.41
PDS5AQ29RF7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDS5AQ29RF7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 AC116562.2-201ENST00000507042 360 ntBASIC23.86■■□□□ 1.41
PDS5AQ29RF7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 AC026271.3-201ENST00000571884 352 ntBASIC23.86■■□□□ 1.41
PDS5AQ29RF7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 REXO1L12P-201ENST00000622156 912 ntBASIC23.86■■□□□ 1.41
PDS5AQ29RF7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 AC073314.1-201ENST00000568729 2216 ntBASIC23.86■■□□□ 1.41
PDS5AQ29RF7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.86■■□□□ 1.41
PDS5AQ29RF7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 TUBB8P6-201ENST00000436895 1288 ntBASIC23.85■■□□□ 1.41
PDS5AQ29RF7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 AL162377.1-201ENST00000618844 1793 ntBASIC23.85■■□□□ 1.41
PDS5AQ29RF7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 AP001271.2-201ENST00000624018 1556 ntBASIC23.85■■□□□ 1.41
PDS5AQ29RF7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.85■■□□□ 1.41
PDS5AQ29RF7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 REXO1L10P-201ENST00000615707 1290 ntBASIC23.84■■□□□ 1.41
PDS5AQ29RF7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDS5AQ29RF7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDS5AQ29RF7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDS5AQ29RF7 AC087499.1-201ENST00000418141 1075 ntBASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms