Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.41■□□□□ 0.7
CACNA1EQ15878 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.41■□□□□ 0.7
CACNA1EQ15878 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1EQ15878 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1EQ15878 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 HLA-G-202ENST00000376815 851 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 HLA-G-203ENST00000376818 1127 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 HMGA1P5-201ENST00000412453 271 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 LIN28AP1-201ENST00000429574 405 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 AC018553.1-201ENST00000616682 1458 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 KRT18P56-201ENST00000507275 550 ntBASIC19.4■□□□□ 0.7
CACNA1EQ15878 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1EQ15878 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1EQ15878 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CACNA1EQ15878 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.39■□□□□ 0.7
CACNA1EQ15878 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1EQ15878 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1EQ15878 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 TPM4P1-201ENST00000436100 807 ntBASIC19.39■□□□□ 0.69
CACNA1EQ15878 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 AC096733.2-201ENST00000609937 1394 ntBASIC19.39■□□□□ 0.69
CACNA1EQ15878 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1EQ15878 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1EQ15878 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 EP400NL-214ENST00000641289 2402 ntBASIC19.38■□□□□ 0.69
CACNA1EQ15878 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CACNA1EQ15878 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 FAM8A6P-201ENST00000407496 1135 ntBASIC19.38■□□□□ 0.69
CACNA1EQ15878 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNA1EQ15878 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.38■□□□□ 0.69
CACNA1EQ15878 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNA1EQ15878 FEM1AP4-201ENST00000443167 1987 ntBASIC19.38■□□□□ 0.69
CACNA1EQ15878 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNA1EQ15878 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 AL117328.2-201ENST00000624617 1940 ntBASIC19.37■□□□□ 0.69
CACNA1EQ15878 TFP1-202ENST00000475455 1573 ntBASIC19.37■□□□□ 0.69
CACNA1EQ15878 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 LINC01238-205ENST00000567549 1107 ntBASIC19.37■□□□□ 0.69
CACNA1EQ15878 FAM87A-204ENST00000613235 858 ntBASIC19.37■□□□□ 0.69
CACNA1EQ15878 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CACNA1EQ15878 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms