Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.85■□□□□ 0.61
RAE1P78406 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.85■□□□□ 0.61
RAE1P78406 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAE1P78406 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAE1P78406 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAE1P78406 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RAE1P78406 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.84■□□□□ 0.61
RAE1P78406 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.84■□□□□ 0.61
RAE1P78406 AC091874.3-201ENST00000512672 1195 ntBASIC18.84■□□□□ 0.61
RAE1P78406 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.84■□□□□ 0.61
RAE1P78406 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.84■□□□□ 0.61
RAE1P78406 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAE1P78406 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAE1P78406 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAE1P78406 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.83■□□□□ 0.61
RAE1P78406 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
RAE1P78406 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.83■□□□□ 0.61
RAE1P78406 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
RAE1P78406 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAE1P78406 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.83■□□□□ 0.61
RAE1P78406 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAE1P78406 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAE1P78406 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.83■□□□□ 0.6
RAE1P78406 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.83■□□□□ 0.6
RAE1P78406 AC092666.2-201ENST00000613287 246 ntBASIC18.83■□□□□ 0.6
RAE1P78406 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.83■□□□□ 0.6
RAE1P78406 AC093484.2-201ENST00000580996 2166 ntBASIC18.83■□□□□ 0.6
RAE1P78406 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.83■□□□□ 0.6
RAE1P78406 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAE1P78406 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.83■□□□□ 0.6
RAE1P78406 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAE1P78406 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.6
RAE1P78406 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
RAE1P78406 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.82■□□□□ 0.6
RAE1P78406 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.82■□□□□ 0.6
RAE1P78406 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.82■□□□□ 0.6
RAE1P78406 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
RAE1P78406 AC005829.2-201ENST00000571422 1056 ntBASIC18.82■□□□□ 0.6
RAE1P78406 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAE1P78406 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
RAE1P78406 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAE1P78406 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAE1P78406 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAE1P78406 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 SLC29A4P1-201ENST00000398760 971 ntBASIC18.81■□□□□ 0.6
RAE1P78406 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.81■□□□□ 0.6
RAE1P78406 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.81■□□□□ 0.6
RAE1P78406 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAE1P78406 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.81■□□□□ 0.6
RAE1P78406 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.81■□□□□ 0.6
RAE1P78406 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
RAE1P78406 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.81■□□□□ 0.6
RAE1P78406 MYC-209ENST00000641252 345 ntBASIC18.81■□□□□ 0.6
RAE1P78406 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms