Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.36■□□□□ 0.69
YBX1P67809 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.36■□□□□ 0.69
YBX1P67809 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.36■□□□□ 0.69
YBX1P67809 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
YBX1P67809 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
YBX1P67809 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
YBX1P67809 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.36■□□□□ 0.69
YBX1P67809 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
YBX1P67809 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
YBX1P67809 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
YBX1P67809 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.36■□□□□ 0.69
YBX1P67809 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.35■□□□□ 0.69
YBX1P67809 AC098818.2-201ENST00000564925 2320 ntBASIC19.35■□□□□ 0.69
YBX1P67809 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.35■□□□□ 0.69
YBX1P67809 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
YBX1P67809 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.35■□□□□ 0.69
YBX1P67809 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
YBX1P67809 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.35■□□□□ 0.69
YBX1P67809 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.35■□□□□ 0.69
YBX1P67809 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
YBX1P67809 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 AC092368.3-202ENST00000574180 1591 ntBASIC19.35■□□□□ 0.69
YBX1P67809 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
YBX1P67809 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
YBX1P67809 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
YBX1P67809 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
YBX1P67809 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.34■□□□□ 0.69
YBX1P67809 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
YBX1P67809 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.34■□□□□ 0.69
YBX1P67809 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
YBX1P67809 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.34■□□□□ 0.69
YBX1P67809 CD99P1-205ENST00000527459 561 ntBASIC19.34■□□□□ 0.69
YBX1P67809 PNMA6B-201ENST00000538162 1200 ntBASIC19.34■□□□□ 0.69
YBX1P67809 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.34■□□□□ 0.69
YBX1P67809 AC006557.6-201ENST00000623071 864 ntBASIC19.34■□□□□ 0.69
YBX1P67809 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.34■□□□□ 0.69
YBX1P67809 HLA-B-256ENST00000639848 1089 ntBASIC19.34■□□□□ 0.69
YBX1P67809 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.34■□□□□ 0.69
YBX1P67809 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
YBX1P67809 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
YBX1P67809 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
YBX1P67809 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
YBX1P67809 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
YBX1P67809 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
YBX1P67809 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
YBX1P67809 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.33■□□□□ 0.68
YBX1P67809 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
YBX1P67809 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.33■□□□□ 0.68
YBX1P67809 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.33■□□□□ 0.68
YBX1P67809 AC060766.5-201ENST00000590539 871 ntBASIC19.33■□□□□ 0.68
YBX1P67809 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
YBX1P67809 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.33■□□□□ 0.68
YBX1P67809 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
YBX1P67809 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
YBX1P67809 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
YBX1P67809 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YBX1P67809 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.32■□□□□ 0.68
YBX1P67809 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
YBX1P67809 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
YBX1P67809 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.32■□□□□ 0.68
YBX1P67809 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.32■□□□□ 0.68
YBX1P67809 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
YBX1P67809 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
YBX1P67809 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms