Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.31■□□□□ 0.36
SEC61A1P61619 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.31■□□□□ 0.36
SEC61A1P61619 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.31■□□□□ 0.36
SEC61A1P61619 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 AC243732.1-201ENST00000612648 864 ntBASIC17.31■□□□□ 0.36
SEC61A1P61619 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.31■□□□□ 0.36
SEC61A1P61619 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 AC099778.1-201ENST00000568593 1911 ntBASIC17.31■□□□□ 0.36
SEC61A1P61619 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.31■□□□□ 0.36
SEC61A1P61619 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.31■□□□□ 0.36
SEC61A1P61619 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 AC245052.3-201ENST00000450182 901 ntBASIC17.3■□□□□ 0.36
SEC61A1P61619 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.3■□□□□ 0.36
SEC61A1P61619 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 AC007225.1-201ENST00000566331 1836 ntBASIC17.3■□□□□ 0.36
SEC61A1P61619 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.3■□□□□ 0.36
SEC61A1P61619 AL512408.1-201ENST00000569378 2000 ntBASIC17.3■□□□□ 0.36
SEC61A1P61619 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SEC61A1P61619 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.3■□□□□ 0.36
SEC61A1P61619 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61A1P61619 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.29■□□□□ 0.36
SEC61A1P61619 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SEC61A1P61619 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SEC61A1P61619 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SEC61A1P61619 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SEC61A1P61619 AC091799.1-201ENST00000422823 811 ntBASIC17.29■□□□□ 0.36
SEC61A1P61619 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.29■□□□□ 0.36
SEC61A1P61619 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.29■□□□□ 0.36
SEC61A1P61619 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.29■□□□□ 0.36
SEC61A1P61619 AC098934.4-201ENST00000564127 592 ntBASIC17.29■□□□□ 0.36
SEC61A1P61619 AC069236.1-201ENST00000604339 616 ntBASIC17.29■□□□□ 0.36
SEC61A1P61619 AL591742.1-201ENST00000604433 565 ntBASIC17.29■□□□□ 0.36
SEC61A1P61619 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.29■□□□□ 0.36
SEC61A1P61619 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SEC61A1P61619 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 MKRN4P-201ENST00000444706 1521 ntBASIC17.28■□□□□ 0.36
SEC61A1P61619 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.28■□□□□ 0.36
SEC61A1P61619 AC142086.2-201ENST00000569753 217 ntBASIC17.28■□□□□ 0.36
SEC61A1P61619 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.28■□□□□ 0.36
SEC61A1P61619 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.28■□□□□ 0.36
SEC61A1P61619 AC008694.1-202ENST00000636953 945 ntBASIC17.28■□□□□ 0.36
SEC61A1P61619 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SEC61A1P61619 FP700111.2-201ENST00000619190 1892 ntBASIC17.28■□□□□ 0.36
SEC61A1P61619 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SEC61A1P61619 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms