Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 TERF1P2-201ENST00000583350 1212 ntBASIC16.1■□□□□ 0.17
SPCS3P61009 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SPCS3P61009 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.1■□□□□ 0.17
SPCS3P61009 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.09■□□□□ 0.17
SPCS3P61009 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SPCS3P61009 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.09■□□□□ 0.17
SPCS3P61009 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SPCS3P61009 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 AC019069.1-201ENST00000610008 1333 ntBASIC16.09■□□□□ 0.17
SPCS3P61009 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.09■□□□□ 0.17
SPCS3P61009 AL356309.3-201ENST00000624132 1934 ntBASIC16.09■□□□□ 0.17
SPCS3P61009 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SPCS3P61009 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SPCS3P61009 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS3P61009 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.08■□□□□ 0.17
SPCS3P61009 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.08■□□□□ 0.17
SPCS3P61009 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
SPCS3P61009 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.08■□□□□ 0.16
SPCS3P61009 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.08■□□□□ 0.16
SPCS3P61009 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.08■□□□□ 0.16
SPCS3P61009 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SPCS3P61009 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SPCS3P61009 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.08■□□□□ 0.16
SPCS3P61009 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS3P61009 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.07■□□□□ 0.16
SPCS3P61009 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SPCS3P61009 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.07■□□□□ 0.16
SPCS3P61009 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 AL356652.1-201ENST00000615962 565 ntBASIC16.07■□□□□ 0.16
SPCS3P61009 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.07■□□□□ 0.16
SPCS3P61009 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms