Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.6■■□□□ 1.37
PPP4CP60510 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4CP60510 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 AC073314.1-201ENST00000568729 2216 ntBASIC23.6■■□□□ 1.37
PPP4CP60510 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PPP4CP60510 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4CP60510 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
PPP4CP60510 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.6■■□□□ 1.37
PPP4CP60510 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4CP60510 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PPP4CP60510 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4CP60510 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4CP60510 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.59■■□□□ 1.37
PPP4CP60510 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.59■■□□□ 1.37
PPP4CP60510 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.59■■□□□ 1.37
PPP4CP60510 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.59■■□□□ 1.37
PPP4CP60510 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.59■■□□□ 1.37
PPP4CP60510 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4CP60510 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PPP4CP60510 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PPP4CP60510 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4CP60510 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4CP60510 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4CP60510 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PPP4CP60510 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PPP4CP60510 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 AP005212.1-201ENST00000581547 1997 ntBASIC23.58■■□□□ 1.37
PPP4CP60510 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4CP60510 AC116562.2-201ENST00000507042 360 ntBASIC23.58■■□□□ 1.37
PPP4CP60510 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.58■■□□□ 1.37
PPP4CP60510 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4CP60510 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4CP60510 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4CP60510 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.58■■□□□ 1.37
PPP4CP60510 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4CP60510 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4CP60510 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4CP60510 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 ECEL1P3-201ENST00000427961 737 ntBASIC23.57■■□□□ 1.36
PPP4CP60510 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.57■■□□□ 1.36
PPP4CP60510 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4CP60510 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4CP60510 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4CP60510 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.56■■□□□ 1.36
PPP4CP60510 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 AL162377.1-201ENST00000618844 1793 ntBASIC23.56■■□□□ 1.36
PPP4CP60510 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.56■■□□□ 1.36
PPP4CP60510 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
PPP4CP60510 REXO1L10P-201ENST00000615707 1290 ntBASIC23.56■■□□□ 1.36
PPP4CP60510 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.56■■□□□ 1.36
PPP4CP60510 CR392000.1-201ENST00000624770 1228 ntBASIC23.56■■□□□ 1.36
PPP4CP60510 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PPP4CP60510 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4CP60510 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.56■■□□□ 1.36
PPP4CP60510 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.55■■□□□ 1.36
PPP4CP60510 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4CP60510 AC087499.1-201ENST00000418141 1075 ntBASIC23.55■■□□□ 1.36
PPP4CP60510 TUBB8P6-201ENST00000436895 1288 ntBASIC23.55■■□□□ 1.36
PPP4CP60510 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.55■■□□□ 1.36
PPP4CP60510 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.55■■□□□ 1.36
PPP4CP60510 AC012306.2-201ENST00000609350 630 ntBASIC23.55■■□□□ 1.36
PPP4CP60510 AL445675.2-201ENST00000620291 557 ntBASIC23.55■■□□□ 1.36
PPP4CP60510 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4CP60510 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4CP60510 KRT16P1-201ENST00000399124 1418 ntBASIC23.55■■□□□ 1.36
PPP4CP60510 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.55■■□□□ 1.36
PPP4CP60510 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4CP60510 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4CP60510 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.55■■□□□ 1.36
PPP4CP60510 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PPP4CP60510 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4CP60510 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PPP4CP60510 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms