Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 KRT16P6-202ENST00000425692 1426 ntBASIC10.67□□□□□ -0.7
SEC61BP60468 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC10.67□□□□□ -0.7
SEC61BP60468 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 PPOX-219ENST00000544598 813 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 TK2-213ENST00000563369 882 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 GRAP-204ENST00000573099 846 ntTSL 3 BASIC10.67□□□□□ -0.7
SEC61BP60468 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
SEC61BP60468 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61BP60468 GRAMD4P8-201ENST00000605465 1115 ntBASIC10.67□□□□□ -0.7
SEC61BP60468 GLDC-219ENST00000640208 420 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SEC61BP60468 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61BP60468 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61BP60468 KRT16P1-201ENST00000399124 1418 ntBASIC10.67□□□□□ -0.7
SEC61BP60468 KRT8P17-201ENST00000453110 1448 ntBASIC10.67□□□□□ -0.7
SEC61BP60468 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 AC124283.5-201ENST00000624661 1809 ntBASIC10.66□□□□□ -0.7
SEC61BP60468 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SEC61BP60468 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC10.66□□□□□ -0.7
SEC61BP60468 FDX2-207ENST00000494368 584 ntTSL 4 BASIC10.66□□□□□ -0.7
SEC61BP60468 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC10.66□□□□□ -0.7
SEC61BP60468 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC10.66□□□□□ -0.7
SEC61BP60468 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
SEC61BP60468 AC005363.2-201ENST00000618631 242 ntBASIC10.66□□□□□ -0.7
SEC61BP60468 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC10.66□□□□□ -0.7
SEC61BP60468 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 AP006587.1-201ENST00000534129 1502 ntBASIC10.66□□□□□ -0.7
SEC61BP60468 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 LSR-203ENST00000360798 1963 ntTSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 HR-201ENST00000312841 5351 ntTSL 5 BASIC10.66□□□□□ -0.7
SEC61BP60468 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SEC61BP60468 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SEC61BP60468 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.65□□□□□ -0.7
SEC61BP60468 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SEC61BP60468 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms