Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 AP001271.2-201ENST00000624018 1556 ntBASIC14.8□□□□□ -0.04
CMC4P56277 BX119927.1-201ENST00000636596 1552 ntBASIC14.8□□□□□ -0.04
CMC4P56277 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.8□□□□□ -0.04
CMC4P56277 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.79□□□□□ -0.04
CMC4P56277 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.79□□□□□ -0.04
CMC4P56277 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.79□□□□□ -0.04
CMC4P56277 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.79□□□□□ -0.04
CMC4P56277 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.79□□□□□ -0.04
CMC4P56277 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMC4P56277 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.79□□□□□ -0.04
CMC4P56277 PHGDH-210ENST00000641115 1638 ntBASIC14.79□□□□□ -0.04
CMC4P56277 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CMC4P56277 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CMC4P56277 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.78□□□□□ -0.04
CMC4P56277 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.78□□□□□ -0.04
CMC4P56277 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.78□□□□□ -0.04
CMC4P56277 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.78□□□□□ -0.04
CMC4P56277 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.78□□□□□ -0.04
CMC4P56277 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.78□□□□□ -0.04
CMC4P56277 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.78□□□□□ -0.04
CMC4P56277 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.78□□□□□ -0.04
CMC4P56277 AC008403.3-201ENST00000598924 454 ntBASIC14.78□□□□□ -0.04
CMC4P56277 AC006058.3-201ENST00000606217 1069 ntBASIC14.78□□□□□ -0.04
CMC4P56277 ITM2C-210ENST00000620962 501 ntBASIC14.78□□□□□ -0.04
CMC4P56277 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC14.78□□□□□ -0.04
CMC4P56277 LINC01521-201ENST00000504184 1943 ntBASIC14.78□□□□□ -0.04
CMC4P56277 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMC4P56277 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMC4P56277 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMC4P56277 AC073314.1-201ENST00000568729 2216 ntBASIC14.77□□□□□ -0.04
CMC4P56277 SMG8-203ENST00000578922 2178 ntBASIC14.77□□□□□ -0.04
CMC4P56277 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMC4P56277 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.77□□□□□ -0.04
CMC4P56277 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMC4P56277 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMC4P56277 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CMC4P56277 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.77□□□□□ -0.05
CMC4P56277 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CMC4P56277 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.77□□□□□ -0.05
CMC4P56277 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.77□□□□□ -0.05
CMC4P56277 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMC4P56277 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMC4P56277 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMC4P56277 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMC4P56277 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMC4P56277 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.76□□□□□ -0.05
CMC4P56277 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 AL162377.1-201ENST00000618844 1793 ntBASIC14.76□□□□□ -0.05
CMC4P56277 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.76□□□□□ -0.05
CMC4P56277 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.76□□□□□ -0.05
CMC4P56277 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 AC004264.1-201ENST00000608354 794 ntBASIC14.76□□□□□ -0.05
CMC4P56277 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.76□□□□□ -0.05
CMC4P56277 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.76□□□□□ -0.05
CMC4P56277 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMC4P56277 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms