Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN5P54829 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN5P54829 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN5P54829 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.53■□□□□ 0.88
PTPN5P54829 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.53■□□□□ 0.88
PTPN5P54829 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN5P54829 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN5P54829 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN5P54829 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN5P54829 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN5P54829 AC006128.1-201ENST00000624704 1661 ntBASIC20.52■□□□□ 0.88
PTPN5P54829 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PTPN5P54829 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN5P54829 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN5P54829 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PTPN5P54829 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN5P54829 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN5P54829 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN5P54829 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTPN5P54829 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN5P54829 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN5P54829 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN5P54829 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN5P54829 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN5P54829 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
PTPN5P54829 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 AC063952.2-201ENST00000498792 1227 ntBASIC20.51■□□□□ 0.87
PTPN5P54829 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN5P54829 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN5P54829 GPALPP1-207ENST00000611650 899 ntBASIC20.51■□□□□ 0.87
PTPN5P54829 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN5P54829 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN5P54829 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN5P54829 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 PLK5-205ENST00000642079 1969 ntBASIC20.5■□□□□ 0.87
PTPN5P54829 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN5P54829 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PTPN5P54829 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN5P54829 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN5P54829 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN5P54829 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PTPN5P54829 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN5P54829 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN5P54829 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN5P54829 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN5P54829 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN5P54829 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN5P54829 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PTPN5P54829 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN5P54829 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN5P54829 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTPN5P54829 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN5P54829 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PTPN5P54829 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN5P54829 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTPN5P54829 BX664615.1-201ENST00000443558 458 ntBASIC20.49■□□□□ 0.87
PTPN5P54829 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN5P54829 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.49■□□□□ 0.87
PTPN5P54829 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN5P54829 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN5P54829 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN5P54829 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTPN5P54829 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN5P54829 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms