Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUBP1P53384 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUBP1P53384 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.84■□□□□ 0.77
NUBP1P53384 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUBP1P53384 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NUBP1P53384 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NUBP1P53384 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.84■□□□□ 0.77
NUBP1P53384 TSPY21P-201ENST00000433481 731 ntBASIC19.84■□□□□ 0.77
NUBP1P53384 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUBP1P53384 TSPY23P-201ENST00000440136 739 ntBASIC19.84■□□□□ 0.77
NUBP1P53384 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC19.84■□□□□ 0.77
NUBP1P53384 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.84■□□□□ 0.77
NUBP1P53384 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.84■□□□□ 0.77
NUBP1P53384 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUBP1P53384 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.83■□□□□ 0.77
NUBP1P53384 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NUBP1P53384 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUBP1P53384 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUBP1P53384 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.83■□□□□ 0.77
NUBP1P53384 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC19.83■□□□□ 0.77
NUBP1P53384 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUBP1P53384 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC19.83■□□□□ 0.77
NUBP1P53384 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NUBP1P53384 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUBP1P53384 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUBP1P53384 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.83■□□□□ 0.76
NUBP1P53384 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUBP1P53384 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
NUBP1P53384 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NUBP1P53384 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUBP1P53384 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NUBP1P53384 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NUBP1P53384 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.82■□□□□ 0.76
NUBP1P53384 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC19.82■□□□□ 0.76
NUBP1P53384 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.82■□□□□ 0.76
NUBP1P53384 CA15P1-201ENST00000481698 905 ntBASIC19.82■□□□□ 0.76
NUBP1P53384 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC19.82■□□□□ 0.76
NUBP1P53384 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.82■□□□□ 0.76
NUBP1P53384 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.82■□□□□ 0.76
NUBP1P53384 ACTG1P22-201ENST00000603793 1099 ntBASIC19.82■□□□□ 0.76
NUBP1P53384 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUBP1P53384 NPAP1P7-201ENST00000613027 823 ntBASIC19.82■□□□□ 0.76
NUBP1P53384 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC19.82■□□□□ 0.76
NUBP1P53384 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NUBP1P53384 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.82■□□□□ 0.76
NUBP1P53384 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.82■□□□□ 0.76
NUBP1P53384 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.81■□□□□ 0.76
NUBP1P53384 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 KRT8P20-201ENST00000423953 1409 ntBASIC19.81■□□□□ 0.76
NUBP1P53384 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.81■□□□□ 0.76
NUBP1P53384 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.81■□□□□ 0.76
NUBP1P53384 AC020928.2-201ENST00000588717 2197 ntBASIC19.81■□□□□ 0.76
NUBP1P53384 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NUBP1P53384 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUBP1P53384 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.8■□□□□ 0.76
NUBP1P53384 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 YBX1P10-201ENST00000444752 975 ntBASIC19.8■□□□□ 0.76
NUBP1P53384 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.8■□□□□ 0.76
NUBP1P53384 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 RN7SL440P-201ENST00000577855 343 ntBASIC19.8■□□□□ 0.76
NUBP1P53384 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.8■□□□□ 0.76
NUBP1P53384 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.8■□□□□ 0.76
NUBP1P53384 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUBP1P53384 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUBP1P53384 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUBP1P53384 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.79■□□□□ 0.76
NUBP1P53384 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NUBP1P53384 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUBP1P53384 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUBP1P53384 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUBP1P53384 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms