Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB28P51157 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.19■□□□□ 0.66
RAB28P51157 PRKY-204ENST00000533551 1019 ntBASIC19.19■□□□□ 0.66
RAB28P51157 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.19■□□□□ 0.66
RAB28P51157 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB28P51157 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB28P51157 RN7SL471P-201ENST00000580476 299 ntBASIC19.19■□□□□ 0.66
RAB28P51157 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RAB28P51157 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB28P51157 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB28P51157 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RAB28P51157 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB28P51157 AC018553.1-201ENST00000616682 1458 ntBASIC19.18■□□□□ 0.66
RAB28P51157 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB28P51157 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB28P51157 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB28P51157 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB28P51157 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.18■□□□□ 0.66
RAB28P51157 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB28P51157 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB28P51157 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB28P51157 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAB28P51157 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB28P51157 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB28P51157 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB28P51157 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB28P51157 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB28P51157 AP001271.2-201ENST00000624018 1556 ntBASIC19.16■□□□□ 0.66
RAB28P51157 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB28P51157 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB28P51157 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RAB28P51157 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
RAB28P51157 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB28P51157 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.16■□□□□ 0.66
RAB28P51157 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB28P51157 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB28P51157 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RAB28P51157 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB28P51157 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RAB28P51157 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 TCF3P1-201ENST00000423021 1937 ntBASIC19.15■□□□□ 0.66
RAB28P51157 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB28P51157 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 TFP1-202ENST00000475455 1573 ntBASIC19.15■□□□□ 0.66
RAB28P51157 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB28P51157 AC239809.2-201ENST00000415381 517 ntBASIC19.15■□□□□ 0.66
RAB28P51157 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB28P51157 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB28P51157 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms