Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC9A3P48764 AC016405.3-201ENST00000607710 860 ntBASIC18.15■□□□□ 0.5
SLC9A3P48764 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC9A3P48764 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC9A3P48764 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC9A3P48764 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC9A3P48764 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC9A3P48764 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 AL691432.2-201ENST00000607222 2038 ntBASIC18.15■□□□□ 0.5
SLC9A3P48764 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SLC9A3P48764 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC9A3P48764 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC9A3P48764 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC9A3P48764 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SLC9A3P48764 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 MCRIP2P1-201ENST00000394346 511 ntBASIC18.14■□□□□ 0.49
SLC9A3P48764 RARRES2P4-201ENST00000514074 484 ntBASIC18.14■□□□□ 0.49
SLC9A3P48764 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC9A3P48764 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC9A3P48764 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SLC9A3P48764 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.14■□□□□ 0.49
SLC9A3P48764 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC9A3P48764 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLC9A3P48764 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC9A3P48764 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SLC9A3P48764 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC9A3P48764 AC125437.2-201ENST00000625180 2167 ntBASIC18.13■□□□□ 0.49
SLC9A3P48764 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC9A3P48764 AC016769.1-201ENST00000409132 1010 ntBASIC18.13■□□□□ 0.49
SLC9A3P48764 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC9A3P48764 MFSD11-216ENST00000590393 1141 ntBASIC18.13■□□□□ 0.49
SLC9A3P48764 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC9A3P48764 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SLC9A3P48764 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC9A3P48764 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC9A3P48764 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC9A3P48764 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC9A3P48764 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC9A3P48764 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.12■□□□□ 0.49
SLC9A3P48764 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 KRT18P5-201ENST00000436075 1291 ntBASIC18.12■□□□□ 0.49
SLC9A3P48764 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SLC9A3P48764 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC9A3P48764 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC9A3P48764 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC9A3P48764 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC9A3P48764 AC138932.1-201ENST00000534164 6830 ntBASIC18.11■□□□□ 0.49
SLC9A3P48764 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC9A3P48764 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC9A3P48764 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC9A3P48764 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC9A3P48764 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC9A3P48764 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC9A3P48764 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC9A3P48764 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SLC9A3P48764 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms