Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.879e-8■■■■□ 21.7
MATR3P43243 COPS2-205ENST00000558843 803 ntTSL 1 (best)3.13□□□□□ -1.913e-9■■■■□ 21.7
MATR3P43243 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.919e-6■■■■□ 21.7
MATR3P43243 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.06□□□□□ -1.929e-6■■■■□ 21.7
MATR3P43243 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.99□□□□□ -1.933e-9■■■■□ 21.7
MATR3P43243 FBXO11-204ENST00000424163 560 ntTSL 42.66□□□□□ -1.989e-6■■■■□ 21.7
MATR3P43243 SGO2-206ENST00000488636 576 ntTSL 42.19□□□□□ -2.069e-6■■■■□ 21.7
MATR3P43243 ZMYM2-201ENST00000382870 3456 ntTSL 1 (best)2.18□□□□□ -2.069e-8■■■■□ 21.7
MATR3P43243 SHANK2-216ENST00000482659 381 ntTSL 34.97□□□□□ -1.611e-6■■■■□ 21.6
MATR3P43243 CUL5-205ENST00000532064 1109 ntTSL 519.76■□□□□ 0.751e-6■■■■□ 21.6
MATR3P43243 CUL5-202ENST00000526303 751 ntTSL 213.49□□□□□ -0.251e-6■■■■□ 21.6
MATR3P43243 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.311e-6■■■■□ 21.6
MATR3P43243 CUL5-203ENST00000531427 3596 ntTSL 1 (best)7.3□□□□□ -1.241e-6■■■■□ 21.6
MATR3P43243 AIG1-206ENST00000458219 593 ntTSL 27.51□□□□□ -1.214e-7■■■■□ 21.6
MATR3P43243 AIG1-207ENST00000470265 572 ntTSL 24.08□□□□□ -1.764e-7■■■■□ 21.6
MATR3P43243 SMYD3-205ENST00000453676 562 ntTSL 44.11□□□□□ -1.751e-6■■■■□ 21.6
MATR3P43243 CA8-204ENST00000529918 1697 ntTSL 215.94■□□□□ 0.149e-7■■■■□ 21.6
MATR3P43243 ZNF518A-205ENST00000488700 729 ntTSL 219.08■□□□□ 0.643e-7■■■■□ 21.6
MATR3P43243 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.653e-7■■■■□ 21.6
MATR3P43243 ZNF518A-208ENST00000563195 1594 ntTSL 38.28□□□□□ -1.083e-7■■■■□ 21.6
MATR3P43243 ZNF518A-203ENST00000478086 1579 ntTSL 1 (best)3.35□□□□□ -1.873e-7■■■■□ 21.6
MATR3P43243 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.233e-7■■■■□ 21.6
MATR3P43243 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.14■□□□□ 0.177e-7■■■■□ 21.6
MATR3P43243 DYRK1A-204ENST00000398960 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.67e-7■■■■□ 21.6
MATR3P43243 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.84□□□□□ -1.317e-7■■■■□ 21.6
MATR3P43243 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.71■■□□□ 1.392e-6■■■■□ 21.6
MATR3P43243 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■■■□ 21.6
MATR3P43243 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.532e-6■■■■□ 21.6
MATR3P43243 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.34■□□□□ 0.532e-6■■■■□ 21.6
MATR3P43243 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.142e-6■■■■□ 21.6
MATR3P43243 DNM2-210ENST00000587830 868 ntTSL 512.19□□□□□ -0.462e-6■■■■□ 21.6
MATR3P43243 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC10.15□□□□□ -0.787e-7■■■■□ 21.6
MATR3P43243 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC9.96□□□□□ -0.817e-7■■■■□ 21.6
MATR3P43243 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.97e-7■■■■□ 21.6
MATR3P43243 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC9.24□□□□□ -0.937e-7■■■■□ 21.6
MATR3P43243 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC9.21□□□□□ -0.947e-7■■■■□ 21.6
MATR3P43243 UBE2H-208ENST00000490974 572 ntTSL 524.99■■□□□ 1.591e-6■■■■□ 21.6
MATR3P43243 UBE2H-203ENST00000472396 758 ntTSL 523.33■■□□□ 1.331e-6■■■■□ 21.6
MATR3P43243 UBE2H-205ENST00000480245 436 ntTSL 34.97□□□□□ -1.611e-6■■■■□ 21.6
MATR3P43243 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.164e-7■■■■□ 21.6
MATR3P43243 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.134e-7■■■■□ 21.6
MATR3P43243 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC14.1□□□□□ -0.154e-7■■■■□ 21.6
MATR3P43243 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.214e-7■■■■□ 21.6
MATR3P43243 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)8.05□□□□□ -1.125e-9■■■■□ 21.6
MATR3P43243 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.125e-9■■■■□ 21.6
MATR3P43243 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.253e-6■■■■□ 21.6
MATR3P43243 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.153e-6■■■■□ 21.6
MATR3P43243 ASAP1-215ENST00000524299 550 ntTSL 411.49□□□□□ -0.573e-6■■■■□ 21.6
MATR3P43243 ASAP1-212ENST00000521426 566 ntTSL 47.77□□□□□ -1.173e-6■■■■□ 21.6
MATR3P43243 ASAP1-211ENST00000521075 5406 ntTSL 1 (best)7.08□□□□□ -1.283e-6■■■■□ 21.6
MATR3P43243 ASAP1-209ENST00000520927 742 ntTSL 56.3□□□□□ -1.43e-6■■■■□ 21.6
MATR3P43243 ASAP1-216ENST00000524367 962 ntTSL 53.64□□□□□ -1.833e-6■■■■□ 21.6
MATR3P43243 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.784e-7■■■■□ 21.6
MATR3P43243 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.854e-7■■■■□ 21.6
MATR3P43243 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.014e-7■■■■□ 21.6
MATR3P43243 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.124e-7■■■■□ 21.6
MATR3P43243 ACP6-206ENST00000609196 1874 ntTSL 314.34□□□□□ -0.111e-6■■■■□ 21.6
MATR3P43243 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.583e-7■■■■□ 21.6
MATR3P43243 GPHN-211ENST00000556020 562 ntTSL 418.83■□□□□ 0.62e-6■■■■□ 21.6
MATR3P43243 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.012e-6■■■■□ 21.6
MATR3P43243 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC13.94□□□□□ -0.182e-6■■■■□ 21.6
MATR3P43243 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.612e-6■■■■□ 21.6
MATR3P43243 GPHN-206ENST00000553936 574 ntTSL 37.13□□□□□ -1.272e-6■■■■□ 21.6
MATR3P43243 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.18□□□□□ -1.422e-6■■■■□ 21.6
MATR3P43243 GPHN-210ENST00000555668 550 ntTSL 44.49□□□□□ -1.692e-6■■■■□ 21.6
MATR3P43243 GPHN-215ENST00000557654 503 ntTSL 44.29□□□□□ -1.722e-6■■■■□ 21.6
MATR3P43243 GPHN-214ENST00000556633 512 ntTSL 33.68□□□□□ -1.822e-6■■■■□ 21.6
MATR3P43243 DLG1-218ENST00000453607 539 ntTSL 44.17□□□□□ -1.747e-7■■■■□ 21.6
MATR3P43243 BUD23-208ENST00000432522 1074 ntTSL 220.61■□□□□ 0.893e-16■■■■□ 21.6
MATR3P43243 PPP2R5C-207ENST00000553730 1227 ntTSL 220.78■□□□□ 0.922e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC12.74□□□□□ -0.372e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.562e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.93□□□□□ -1.142e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-229ENST00000557621 759 ntTSL 55.59□□□□□ -1.512e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-219ENST00000556307 601 ntTSL 35.19□□□□□ -1.582e-6■■■■□ 21.6
MATR3P43243 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.62□□□□□ -1.832e-6■■■■□ 21.6
MATR3P43243 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.92e-6■■■■□ 21.5
MATR3P43243 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.752e-6■■■■□ 21.5
MATR3P43243 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.84■□□□□ 0.132e-6■■■■□ 21.5
MATR3P43243 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.112e-6■■■■□ 21.5
MATR3P43243 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.171e-7■■■■□ 21.5
MATR3P43243 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.157e-7■■■■□ 21.5
MATR3P43243 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC14.61□□□□□ -0.077e-7■■■■□ 21.5
MATR3P43243 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■■■□ 21.5
MATR3P43243 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC13.14□□□□□ -0.317e-7■■■■□ 21.5
MATR3P43243 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC12.13□□□□□ -0.471e-7■■■■□ 21.5
MATR3P43243 LMBR1-215ENST00000461603 612 ntTSL 45.76□□□□□ -1.491e-6■■■■□ 21.5
MATR3P43243 ACSL3-203ENST00000407441 538 ntTSL 33.91□□□□□ -1.783e-7■■■■□ 21.5
MATR3P43243 ACSL3-208ENST00000495541 749 ntTSL 23.82□□□□□ -1.83e-7■■■■□ 21.5
MATR3P43243 EPB41L2-208ENST00000524581 3090 ntTSL 1 (best) BASIC12.64□□□□□ -0.392e-9■■■■□ 21.5
MATR3P43243 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9□□□□□ -0.972e-9■■■■□ 21.5
MATR3P43243 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.39□□□□□ -1.073e-6■■■■□ 21.5
MATR3P43243 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC11.94□□□□□ -0.51e-6■■■■□ 21.5
MATR3P43243 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC10.73□□□□□ -0.691e-6■■■■□ 21.5
MATR3P43243 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC10.49□□□□□ -0.731e-6■■■■□ 21.5
MATR3P43243 DHRSX-207ENST00000478825 679 ntTSL 224.77■■□□□ 1.561e-6■■■■□ 21.5
MATR3P43243 DHRSX-202ENST00000412516 744 ntTSL 222.15■■□□□ 1.141e-6■■■■□ 21.5
MATR3P43243 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.951e-6■■■■□ 21.5
MATR3P43243 DHRSX-205ENST00000444280 797 ntTSL 218.78■□□□□ 0.61e-6■■■■□ 21.5
MATR3P43243 DHRSX-204ENST00000441131 539 ntTSL 28.3□□□□□ -1.081e-6■■■■□ 21.5
Retrieved 100 of 16,209 protein–RNA pairs in 126 ms