Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL13AP40429 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL13AP40429 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL13AP40429 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.7□□□□□ -0.22
RPL13AP40429 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL13AP40429 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL13AP40429 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RPL13AP40429 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 AC079089.2-201ENST00000531211 1277 ntBASIC13.69□□□□□ -0.22
RPL13AP40429 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.69□□□□□ -0.22
RPL13AP40429 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RPL13AP40429 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL13AP40429 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPL13AP40429 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.68□□□□□ -0.22
RPL13AP40429 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 SNX5-217ENST00000606557 1087 ntBASIC13.68□□□□□ -0.22
RPL13AP40429 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RPL13AP40429 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL13AP40429 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL13AP40429 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RPL13AP40429 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.67□□□□□ -0.22
RPL13AP40429 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.67□□□□□ -0.22
RPL13AP40429 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms