Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LSP1P33241 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.91■□□□□ 0.78
LSP1P33241 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.91■□□□□ 0.78
LSP1P33241 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
LSP1P33241 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.91■□□□□ 0.78
LSP1P33241 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.91■□□□□ 0.78
LSP1P33241 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.91■□□□□ 0.78
LSP1P33241 AC092171.4-201ENST00000609130 632 ntBASIC19.91■□□□□ 0.78
LSP1P33241 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.91■□□□□ 0.78
LSP1P33241 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.91■□□□□ 0.78
LSP1P33241 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 KRT8P36-201ENST00000489121 1440 ntBASIC19.91■□□□□ 0.78
LSP1P33241 NOC2LP1-202ENST00000452600 2235 ntBASIC19.91■□□□□ 0.78
LSP1P33241 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LSP1P33241 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LSP1P33241 AC005224.4-201ENST00000583262 1652 ntBASIC19.91■□□□□ 0.78
LSP1P33241 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.9■□□□□ 0.78
LSP1P33241 EEF1DP3-203ENST00000566025 782 ntBASIC19.9■□□□□ 0.78
LSP1P33241 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.9■□□□□ 0.78
LSP1P33241 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LSP1P33241 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LSP1P33241 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
LSP1P33241 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.9■□□□□ 0.78
LSP1P33241 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.9■□□□□ 0.78
LSP1P33241 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSP1P33241 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.89■□□□□ 0.77
LSP1P33241 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 AC068880.1-201ENST00000507289 2297 ntBASIC19.89■□□□□ 0.77
LSP1P33241 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 AC053503.5-201ENST00000601508 636 ntBASIC19.89■□□□□ 0.77
LSP1P33241 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.89■□□□□ 0.77
LSP1P33241 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSP1P33241 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.89■□□□□ 0.77
LSP1P33241 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LSP1P33241 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.88■□□□□ 0.77
LSP1P33241 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.88■□□□□ 0.77
LSP1P33241 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LSP1P33241 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LSP1P33241 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LSP1P33241 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.88■□□□□ 0.77
LSP1P33241 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.88■□□□□ 0.77
LSP1P33241 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.88■□□□□ 0.77
LSP1P33241 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.88■□□□□ 0.77
LSP1P33241 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.88■□□□□ 0.77
LSP1P33241 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 AC006333.2-201ENST00000607957 2099 ntBASIC19.88■□□□□ 0.77
LSP1P33241 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
LSP1P33241 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSP1P33241 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LSP1P33241 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.87■□□□□ 0.77
LSP1P33241 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LSP1P33241 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms